If they shut off the transponder, which we know they did, how would they get the traffic information on their NDs? It goes away when you turn off the transponder. To the best of my knowledge that applies to both Mode-S interrogations and ADS/B ones.
Once you go dark, you fly the traditional way with GPS and nav aides (GPS, VORs, etc, are broadcast, so you can use them passively) backed up by manual nav with time, speed, and bearings. Note that handheld (throw it on the dash) pilot grade GPSes are readily available and relatively cheap.
Intercepting the target aircraft is do-able via visual contact if your navigation is reasonably good and the target aircraft is on time.
If you have help on the ground, they could use FlightAware to update the hijacking crew via something like HF radio, again a passive receive on the hijacked aircraft. This would be very helpful for the hijacking crew to improve their intercept by adjusting their speed so that they sneak up under and behind the target aircraft.
Edit: As thekevan points out (https://news.ycombinator.com/item?id=7416153), the hijackers could use a ADS/B receiver (SDR and laptop or equivalent) to receive the position data from the target aircraft. This would make it pretty easy to form up on them. Again, this is passive (the target aircraft broadcasts its ADS/B information).