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I tried to report scientific misconduct. How did it go?

crystalprisonzone.blogspot.com

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Re: I tried to report scientific misconduct. How did it go?

#291
post #224
post #212

Earlier quoted context omitted.

How is medical research shit science?

At least my research is. Mainly due to hierarchical pressure. And from what I see around me, most medical papers must be read with a healthy dose of skepticism. I've personally witnessed incredible feats of dishonesty that I won't describe here. There are multiple reasons degrading research quality. An important one is spreadsheet incompetence. Another one is that medical research goes hand in hand with academic achi…

I think a lot of people have deep enough pockets to fund a side lab. It's worth trying.

Re: I tried to report scientific misconduct. How did it go?

#292
post #224

Earlier quoted context omitted.

At least my research is. Mainly due to hierarchical pressure. And from what I see around me, most medical papers must be read with a healthy dose of skepticism. I've personally witnessed incredible feats of dishonesty that I won't describe here. There are multiple reasons degrading research quality. An important one is spreadsheet incompetence. Another one is that medical research goes hand in hand with academic achi…

I'm a postdoc at a medical school, and this hasn't been my experience. At least in our setup, clinical data tends to be channeled into a collaboration with a computational lab who are better stewards of data handling. Is there cherry picking and over selling the results? Sure. Outright dishonesty is something I have yet to see in my current institution (I did see a fair deal of fudging in my graduate institute, thoug…

Well, I think things are beginning to be better managed in some centers. If that's your case, then good for you. In my center, it's basically the wild west and data management is a catastrophe.

But are you working the clinical wards? Because things are definitely much better managed in places such as epidemiology units. The true horrors mostly come from clinical researchers digging into excel spreadsheets without knowing a mean from a median.

Re: I tried to report scientific misconduct. How did it go?

#293

Earlier quoted context omitted.

More and more evidence that the magazine based publication route is a net negative to science.

Question is, why don't scientists just put everything on public platforms (read: github) and call it a day? Is it only a matter of funding, or do other factors also play a role in that?

GitHub is not a great engine for driving discovery of quality content.

Re: I tried to report scientific misconduct. How did it go?

#294

Earlier quoted context omitted.

The usual way is someone writing a better paper and everyone going "yeah, that's a better reading of the data". Not sure why you say correcting an established consensus would be unrewarding? Sure, for unimportant details getting a correction out isn't much fun, but correcting an important point is basically the career goal of every scientist precisely because it is important and rewarding.

From the author, who specifically stated that this task of correcting bad science is unrewarding.

She stated it is unrewarding because the university didn’t reprimand or remove the bad researcher, and because most papers didn’t retract the bad papers. She didn’t produce new studies disproving the results of the existing one, which might have been a more rewarding pursuit for someone who had that inclination. I’m sure the author has other ideas about what research she should do, and it’s not for us to say.

Re: I tried to report scientific misconduct. How did it go?

#295
post #216

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> Wikipedia is an encyclopaedia An encyclopaedia with rather low standards that many people sadly treat as an absolute source of truth. You're right that this isn't really a wikipedia problem though. It's a matter of education because an overwhelming majority of the population isn't competent enough to fact-check memes on facebook, let alone wikipedia, and if wikipedia doesn't do it either, then that responsibility i…

> An encyclopaedia with rather low standards ... that somehow manages to have articles on proeminent subjects that are more in depth and factual than any competing encyclopedic endeavor, while, at the same time, far surpassing them by orders of magnitude on breadth for obscure and less academic topics. Wikipedia is not an encyclopedia in the traditional sense, and can't be judged on the same standards. It is simply i…

[deleted]

Re: I tried to report scientific misconduct. How did it go?

#296
post #63

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I think that probably most people show integrity... but it's a problem if review processes, editorial mechanisms, and culture reward those who don't show it.

The problem is of a lack of data publishing. All data should be published; all conclusions published (preferably with the code that generated the conclusions) so corrections can be made and improved conclusions drawn easily.

> The problem is of a lack of data publishing

Agreed. If you have any recommendations for long-term public data archival they would be greatly appreciated. OSF recently instituted a 50 GB cap which rules out publishing many types of raw data, and subscription options (AWS, Dropbox, etc.) will lead to link rot when the uploading author changes jobs or retires, or the project's money runs out. Sure, publishing summary spreadsheets is a good first step, but there should be a public place for video and other large data files. IPFS was previously suggested but the data still needs to be hosted somewhere. Maybe YouTube is the best option, despite transcoding?

Re: I tried to report scientific misconduct. How did it go?

#297

In graduate school, in my lab there was a grad student who was kind of an unlikely "professor's pet". He was tall and had surfer's long hair with a bit of a hippie aesthetic. Anyways, he was also really completely clueless about how to do science correctly, but also, I guess, really good about playing politics (there was a time when he asked me to put some bacterial plasmid DNA on my mammalian cells. I told him "it d…

Having worked in both academia and industry in biotech field, I have to say that the bar of reproducibility is a lot higher in industry. In academia, the goal is to publish. The peer-review process won't care to repeat your experiments. And the chance that other lab repeating your experiments was slim -- why spending time repeating other people's success? In contrast, in industry, an experiment has to be bullet-proof…

Theranos showed us that's sadly not true. A good story beats reliable results.

Re: I tried to report scientific misconduct. How did it go?

#298
post #125

In graduate school, in my lab there was a grad student who was kind of an unlikely "professor's pet". He was tall and had surfer's long hair with a bit of a hippie aesthetic. Anyways, he was also really completely clueless about how to do science correctly, but also, I guess, really good about playing politics (there was a time when he asked me to put some bacterial plasmid DNA on my mammalian cells. I told him "it d…

A friend joined a group studying some cell behaviour. They had previously had a big result that they could stimulate this behaviour in defined, serum-free culture by adding a specific factor. Friend was to work on characterising this effect, so his first job was to reproduce the result as a base case. He couldn't. The factor didn't stimulate the behaviour. He asked around, comparing his execution of the protocol with…

I imagine the postdoc would have a negative control of not adding the vector? Otherwise its hard to convince people the effect was coming from the vector.

Re: I tried to report scientific misconduct. How did it go?

#299
post #166

Earlier quoted context omitted.

Because nobody reads it there and, more importantly, funders don't recognise the work you've done there. The "prestige" (as indicated by the scientific-looking but mostly inaccurate "Impact Factor") of the journal you publish in determines how good they think your work is. I wrote about that a while ago here: https://medium.com/flockademic/the-ridiculous-number-that-ca...

> Because nobody reads it there That's a problem that would fix itself the moment most useful research was mainly available on such platforms. > more importantly, funders don't recognise the work you've done there Once again, that sounds like mostly a problem that would disappear if a large migration to open platforms was to happen. ---- So it seems the main poroblem seems to be that there's no incentive to be among…

Yep exactly, it's a classic coordination problem.

Re: I tried to report scientific misconduct. How did it go?

#300

Earlier quoted context omitted.

I tend to limit my use of "science denier" when an organization or its followers systematically deny scientific knowledge on multiple unrelated fronts. Interestingly, I have read that in the 1920s and 30s, there was actually an organized relativity denialist movement, that wrote articles and held public protests.

Relativity was a huge philosophical shift from the comparative simplicity of Newton's laws. It's not surprising that there was resistance to it. Tesla was famously against relativity, telling the New York Times, "Einstein’s relativity work is a magnificent mathematical garb which fascinates, dazzles and makes people blind to the underlying errors. The theory is like a beggar clothed in purple whom ignorant people tak…

Indeed, and the anti-relativity movement also had a very strong undercurrent of antisemitism.

Chances are, most of the people marching against relativity had no clue about Newtonian mechanics, and were told stuff such as relativity leading to moral relativism.

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