Honestly interesting sources!
I feel like you shouldn't be downvoted. I don't agree with how you phrased what you wrote but I understand you're just expressing your view. I'm sort of on the side of well atheists are not treated well in society compared to the majority being religious and makes the statistics that way.
My personal experience of myself is contrary to the study. I'm both agnostic & transgender. I suffer daily from my gender dysphoria and how society treated me in life because of my gender dysphoria. I was conditioned growing up in the anti-gay era of time and I wasn't able to transition young. I'm not in the financial situation to really do anything to help myself and approaching my 30s. I've been seeking suicide by the legal process of going to Switzerland & in my birth country Canada (I grew up in the USA). The main drive for suicide has been acknowledging the possibility of how a lot of the bad experiences in my life, maybe influenced by a higher power, is wanting me to die and so my sex can be corrected. Society isn't really getting better for people like me with the trump administration and with the recent news showing to limit people like me further. I sort of come to conclusion the atmosphere now of things are getting better isn't really true but just a moment in time where things were more positive but can easily be reversed. I don't even know what to really trust anymore but the point is that maybe my life has been so poor because I should die because an all loving God would correct my problem; which made me miss out on a lot in life.