Earlier quoted context omitted.
This. The minimum difference in scene length allowable would be a single frame.
Do you actually know that or are you speculating? I wouldn't be surprised if MP4 (or other video formats) provided a mechanism for tweaking the timing of a given frame. Of course, if you're using such a primitive watermark you might as well just add a note in the metadata...
You know how annoying it is when you watch a movie and there's some sort of 2-dimensional 'hacker' character and s/he just says some gobbledegook about 'hacking the password' or whatever, you see something a progress bar briefly on screen, and then the actor says 'we're in!' In short, how stupid movies can be about computer topics? Well that's how it feels when someone who knows nothing about video formats or editing comes up with suggestions about adjusting the length between scenes by a few milliseconds and having it slightly different for every viewer.