The article makes a few generalizations about evolution that don't really hold up. The idea that evolution does not have agency needs to be re-examined in the light of the fact that animals themselves have far more agency than we realized. To use the author's example, cheetahs may well have all decided as a group to run faster, in the sort of 'social learning' way that we're just now starting to really get a grip on.…
"...we don't know how genomes hold on to experiences and then pass them along to our offspring. " Err they don't. That's Lamarckism theory, and I wasn't aware there was even a shred of evidence towards it. Sometimes when you don't know how something happens, its because it isn't actually happening
There is quite a bit from the last few years. Gene expression in particular is a field we continue to learn a lot about [0] and several studies have suggested Lamarckism might have some merit [1].
Saying there isn't a "shred of evidence" is just scientifically untrue. There is some legitimate evidence that limited information could be passed from mother to child prenatally.
Your post is the classic Dunning–Kruger effect. Few in evolutionary biology would be as "sure" as you are, and you get less and less sure the more you learn.
[0] http://www.ncbi.nlm.nih.gov/books/NBK43787/ [1] https://en.wikipedia.org/wiki/Lamarckism#Epigenetic_inherita...