The issue I have with third-party token applications like the Duo Security one that the github guys are recommending is that due to the way how TOTP works (shared secret), I'm practically giving away my second factor to whoever produces the app. Google Authenticator has the advantage that it's Open Source, but I can't really control whether the thing I downloaded in the app store is actually built from the public sou…
Yep. I opened mine one day and all my keys were gone. It's a real pain.