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Mendeley users revolt against Elsevier takeover

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Re: Mendeley users revolt against Elsevier takeover

#101
post #21

Earlier quoted context omitted.

It depends on what parts you're using. If you're using Mendeley mainly as a personal reference manager, Zotero is as good as Mendeley or better imo. But it doesn't have a web-based social layer like Mendeley does, for people who like that part.

I think Mendeley had more advantages over Zotero than the social aspect (which I never used). Mendeley could automatically incorporate your folder of orphan PDFs into your library, automatically fetching the bibliographic info. It had a nice dedicated desktop client for searching your library, correctly bib info, and adding notes and whatnot to papers, which just isn't as nice on a browser.

You might think a lot of things, but your description of Zotero is completely inaccurate. Zotero isn't a browser-based application, and it can do everything you describe.

Re: Mendeley users revolt against Elsevier takeover

#102
post #49
post #4

I don't get it. It was absolutely clear that they were using a propiretory software owned by a for-profit company. There a perfectly viable alternatives, Open Source and free to use e.g. Zotero et al.

I really like the way Mendeley handles notes, specifically highlighting / annotating PDFs. Do you know of any alternatives that include this? I was planning on writing my own at some point but it might be a bit ambitious.

You could also submit a feature request to Zotero:

https://forums.zotero.org/7/

Or build it yourself if so inclined/able:

http://www.zotero.org/support/dev/sample_plugin

http://www.zotero.org/support/dev/svn_and_trac_access

Re: Mendeley users revolt against Elsevier takeover

#103

Earlier quoted context omitted.

I think Mendeley had more advantages over Zotero than the social aspect (which I never used). Mendeley could automatically incorporate your folder of orphan PDFs into your library, automatically fetching the bibliographic info. It had a nice dedicated desktop client for searching your library, correctly bib info, and adding notes and whatnot to papers, which just isn't as nice on a browser.

You might think a lot of things, but your description of Zotero is completely inaccurate. Zotero isn't a browser-based application, and it can do everything you describe.

You're new here so pro-tip: More concrete details, less snark, or you're gonna downvoted to oblivion.

Instead of just telling someone they're wrong, explain why. How is Zotero not a browser-based application, and how does it do everything OP described?

Re: Mendeley users revolt against Elsevier takeover

#104

Earlier quoted context omitted.

an organization dedicated, not to maximize profits for shareholders, but to keep power over scientific research in people’s hands That's why we have governments. No, I'm not being sarcastic. The public sector is there to serve the public good, and this is quite obviously a public good. I'm not anti-privatization either. Private exploitation under public laws and guidelines is a common strategy to solve these issues.…

> It's time we address the real problem. The real problem is that some companies manage to exploit a monopoly granted to them by the government in ways that are not pleasing to the public. The government is the entity which created the problem. Granted, while solving another but it will still be the government agents who break down your door and arrest you if you build an unauthorized competitor or even just try to r…

[deleted]

Re: Mendeley users revolt against Elsevier takeover

#105
post #14
post #4

I don't get it. It was absolutely clear that they were using a propiretory software owned by a for-profit company. There a perfectly viable alternatives, Open Source and free to use e.g. Zotero et al.

I have personally integrated Mendeley into my process as a student, despite the fact that I should have known better. Sometimes everyone gets distracted by shiny things, I guess. Shame on me.

Mendeley is not going to stop working all of a sudden. It's still the same tool, developed by the same people, with the same roadmap and vision ahead.

Re: Mendeley users revolt against Elsevier takeover

#106

Earlier quoted context omitted.

an organization dedicated, not to maximize profits for shareholders, but to keep power over scientific research in people’s hands That's why we have governments. No, I'm not being sarcastic. The public sector is there to serve the public good, and this is quite obviously a public good. I'm not anti-privatization either. Private exploitation under public laws and guidelines is a common strategy to solve these issues.…

> It's time we address the real problem. The real problem is that some companies manage to exploit a monopoly granted to them by the government in ways that are not pleasing to the public. The government is the entity which created the problem. Granted, while solving another but it will still be the government agents who break down your door and arrest you if you build an unauthorized competitor or even just try to r…

So you're arguing that because the government has a monopoly on force, anything bad that happens anywhere in the US is their fault because it's their guns backing up the law?

Laws happen because a variety of agents (lobbyists, legislators, public interest groups) push for them. They're not enacted by some amorphous specter of 'government'.

Re: Mendeley users revolt against Elsevier takeover

#107

Earlier quoted context omitted.

You might think a lot of things, but your description of Zotero is completely inaccurate. Zotero isn't a browser-based application, and it can do everything you describe.

You're new here so pro-tip: More concrete details, less snark, or you're gonna downvoted to oblivion. Instead of just telling someone they're wrong, explain why. How is Zotero not a browser-based application, and how does it do everything OP described?

Sure! Zotero has been available as a standalone application for several years (and even when it only ran within Firefox in the early days, it was still a local application): http://www.zotero.org/download/

Zotero retrieves PDF metadata using a Google Scholar lookup, a method that Mendeley later adopted: http://www.zotero.org/support/retrieve_pdf_metadata

This process can also be applied to a watch folder using the third-party add-on ZotFile (Zotero supports extensions): http://www.columbia.edu/~jpl2136/zotfile.html

Zotero has always allowed all kinds of searching of metadata and content: http://www.zotero.org/support/searching

Zotero also includes notes (and these notes can be pulled from PDF annotations using ZotFile): http://www.zotero.org/support/notes

Re: Mendeley users revolt against Elsevier takeover

#108
post #21

Earlier quoted context omitted.

It depends on what parts you're using. If you're using Mendeley mainly as a personal reference manager, Zotero is as good as Mendeley or better imo. But it doesn't have a web-based social layer like Mendeley does, for people who like that part.

I think Mendeley had more advantages over Zotero than the social aspect (which I never used). Mendeley could automatically incorporate your folder of orphan PDFs into your library, automatically fetching the bibliographic info. It had a nice dedicated desktop client for searching your library, correctly bib info, and adding notes and whatnot to papers, which just isn't as nice on a browser.

    > I think Mendeley had more advantages over Zotero than the social aspect
    > (which I never used). Mendeley could automatically incorporate your
    > folder of orphan PDFs into your library
So can Zotero.

http://www.zotero.org/support/retrieve_pdf_metadata

    > automatically fetching the bibliographic info.
https://github.com/zotero/translators

https://github.com/zotero/translation-server

(Those two repositories are the greatest things about Zotero, in my opinion. Holy crap.)

    > It had a nice dedicated desktop client for searching your library
Zotero standalone seems to be listed here very prominently:

http://www.zotero.org/download/

Re: Mendeley users revolt against Elsevier takeover

#109
post #21

Earlier quoted context omitted.

It depends on what parts you're using. If you're using Mendeley mainly as a personal reference manager, Zotero is as good as Mendeley or better imo. But it doesn't have a web-based social layer like Mendeley does, for people who like that part.

I think Mendeley had more advantages over Zotero than the social aspect (which I never used). Mendeley could automatically incorporate your folder of orphan PDFs into your library, automatically fetching the bibliographic info. It had a nice dedicated desktop client for searching your library, correctly bib info, and adding notes and whatnot to papers, which just isn't as nice on a browser.

Why the use of the past tense? Mendeley still has all those features and more. :) Also, the open API we provide allows for building third-party applications like Android apps and such. But I digress. :)

(Disclosure: I'm part of the Mendeley team)

Re: Mendeley users revolt against Elsevier takeover

#110
post #87
post #82

Earlier quoted context omitted.

> Provide for the papers a system of transparent reviews... [snipped] I don't think this is a technical issue. Journals make mistakes on which papers to publish all the time, even when the referees work hard and take the review seriously, so this is hard for committed people to do well.

Sure, but reviews are not transparent, nor accessible to the public. Why not? Wouldn't it be nice to see what other people think about the article before reading it? Currently there are citations, but that's about it.

A public review of article X by reviewer Y would often be quite different than a double-blind review of the same article by the same reviewer.

There are some arguments for both approaches, but I believe that the double-blind approach is much better.

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