Earlier quoted context omitted.
I could be missing something, but it looks like you are using the default settings. Have you tried tweaking it all? Specifically setting apc.stat=0, which will stop it from checking the mtime. You'll need to clear the cache with apc_clear_cache() when you make code changes though. You may also want to look at apc.php to check for fragmentation and adjust apc.shm_size if necessary
fork, benchmark, and create a pull request. :)
I'll add in apc.php to help make sure other things are tuned properly though. different settings could be appropriate for different servers...