* the simplest is just mixing filaments, like one mixes paint. The article doesn't spell out the reason it doesn't work, I am curious as to why.
* together with alternating layers, colors could be alternated in the same layer. Some purging may be necessary, but I think you could either: accept some mixing (compute its impact to compensate) / take into account the volume in the nozzle (extrusion "latency") / discard the unwanted part in the infill (at the cost of less smooth edges)
Of course, the hard work with any approach, including their current work, is calibration, as the article highlights. I wonder if off-the-shelf monitor calibration sensors could help with measuring the filament you have at hand.