Better still you can do it iteratively. Take cells from one person and turn them into a few hundred eggs. Take cells from a second person and turn them into sperm (or conceivably the same person.) Fertilize the eggs with the sperm, grow them out to blastocysts, biopsy, and sequence. Pick the embryo with the most desirable genotype score, turn the rest of the blastocyst’s cells into sperm and eggs. Rinse and repeat. You’ll end up converging towards the highest genotype score possible given the parental material.
Edit: you probably want to use two embryos in each round to avoid a local maxima. I’m sure someone will work out the math when the time comes.