Earlier quoted context omitted.
I agree with your logic but would add one more thing to it: There is no compelling reason to wait until a planet conclusively proves it has intelligence on it to nuke it into oblivion with a kinetic kill projectile. You don't really know how long it will take for an intelligent species that could compete with you to arise. Humans have moved pretty quickly on cosmological scales, there's no particular reason to believ…
If I use humanity as a model, then we don't see other great apes as dangerous competitors. Rather we see them as interesting curiosities. We want them to stay alive. But it's hard to resist the desire to turn their habitats into something economically productive. Colonizing other planets and making them into homes for aliens long before a native civilization has a chance to arise seems more plausible than just destro…
(Of course, you may still have any amount of conflict with your fellow settlers, or your someone in your original species' descendants two systems over, but that's a completely different conversation.)