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Medicine's Machine Learning Problem

bostonreview.net

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Re: Medicine's Machine Learning Problem

#111
post #108

Earlier quoted context omitted.

Depends on the scope of the project. Would the goal be to come up with a better algorithm for cell classification based on histological images? Or to apply an existing algorithm to a new dataset? The former would be quite difficult without much background in ML/Computer Vision (you would have to spend some time self-teaching basics of ML/Deep Learning and the pre-reqs for those — Basic Linear Algebra and Probability)…

The data in the database comes from a bidimensional matrix (LMNE) where leucocytes are classified on resistivity on one axis and light absorption (?) on the other. (I wonder how they managed the separation by absorption... indirectly via centrifugation ?) So I guess not really histological ? Looks like it's a new model, I have no idea if they already have any ML models yet. There's also some database work. I'm finish…

Given your background, I think it would be worthwhile for you to pick up ESL [0] and read some relevant sections (supervised/sparse/linear methods). It's a great book and a good starting point for thinking about ML methods for high dimensional data.

Also, might be useful to took at webpages of some researchers in this space and courses they teach [1,2].

  [0] https://web.stanford.edu/~hastie/ElemStatLearn/  
  [1] https://scholars.duke.edu/person/dunson  
  [2] https://www.cs.princeton.edu/~bee/

Re: Medicine's Machine Learning Problem

#112
post #111

Earlier quoted context omitted.

The data in the database comes from a bidimensional matrix (LMNE) where leucocytes are classified on resistivity on one axis and light absorption (?) on the other. (I wonder how they managed the separation by absorption... indirectly via centrifugation ?) So I guess not really histological ? Looks like it's a new model, I have no idea if they already have any ML models yet. There's also some database work. I'm finish…

Given your background, I think it would be worthwhile for you to pick up ESL [0] and read some relevant sections (supervised/sparse/linear methods). It's a great book and a good starting point for thinking about ML methods for high dimensional data. Also, might be useful to took at webpages of some researchers in this space and courses they teach [1,2]. [0] https://web.stanford.edu/~hastie/ElemStatLearn/ [1] https://…

Thank you !

Funny (but I guess expected) to see the Markov Chain Monte Carlo method that we very recently learned in that book's table of contents ! (Unless it's another MCMC ?)

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