I couldn't find this point discussed elsewhere in the comments. I think this is one of the most important sentences in the whole article. I know this is essentially just another perspective on Conway's law, but I think it is important to identify factors like this early in a project if at all possible so that human factors around development can be factored out of engineering decisions.
I think that this is especially critical for open projects that want to achieve long term sustainability. Open communities don't have the resources to maintain all the packages, even if they use the same build system and follow the same pattern, even if most of the maintenance can be automated, some human being still has to deal each of those systems separately because they are part of the environment surrounding that individual part of the project.