Sure, each instance of consciousness is independent, regardless of whether it shared history with another consciousness instance, and would feel things independently. I'm glad we're on agreement here.
Apparently we don't mean the same thing by "cloning". Let's call it "forking".
Btw, the same "uniqueness" issue applies to running software as well. The instance of a running software is not the same thing as the code of the software. If you take a snapshot of a software running on machine A and resume it on machine B, they no longer _are_ the same instance. It's clear that they exist independently because you can act on them independently and their state and future reactions will diverge.
That said, it's trivial for us to run n copies of the same state transitions with software (in lock step), something that might just not be possible for us to do with arbitrary precision on biological systems. That's not what I meant by cloning: I'm not saying having an exact "lock-step" reproduction of whatever the internal mechanism of consciousness is (that would be another debate).
But let's get back to the main point of my argument in this thread:
Wigner's friend thought experiment is absurd/paradoxical only if we cling to the notion that we'd somehow be subjectively affected by the fact that nature effectively forks off and entertain parallel histories for complex systems such as conscious beings in the same way as it seems to fork off and entertain parallel histories for simpler quantum systems when they are in superposition state. We don't have to invoke the many-worlds interpretation, which is just an interpretation; we can jus look at the math that describes how quantum states evolve: our most accurate description of what we observe in the world tells us that the behaviour of particles is consistent with viewing them as if they fork off and evolve in parallel over time until, at some point, when we add ourselves in the mix as "observers" then suddenly puff this superposition collapses and we observe the particle having a concrete state, at random.
Common ways to explain this collapse are:
1. The act of observing a system, done by a conscious being, collapses the quantum state, because consciousness is special
2. A conscious being it's just a very complex system that obeys the same rules governing the system it obseves, and thus gets involved in the superposition while performing the measurement, literally becoming part of the superposition. Thus the observed randomness is just an artefact of subjectively "waking up in room 1"
Wigner's setup exaggerates this problem by adding another observer (the scientist friend). It poses absolutely no problems of you espouse the second explaination above.
It poses all sorts of problems if you absolutely cannot stomach the possibility that all of us people might not live in a uniform linear objective reality that works according to our intuition.
Simple != Intuitive