Earlier quoted context omitted.
But this guy mostly took a look at things from widely discredited and dishonest Intelligent Design and Creationist sources (every single person he mentions in his article). ID organizations like the Discovery Institute (of which he quotes people related to) is known to be fundamentally dishonest in trying to hide religious beliefs and pass them as science. So it's fundamentally dishonest. If this CS professor said "I…
Let me get this straight... a noteworthy CS professor points out some obvious and undeniable flaws in the current theory or protein 'evolution.' He also points out that is difficult to get serious researchers to grapple with this issue because Darwinism has turned into a dogma where people are viciously attacked if they point out some fundamental flaws with the idea. Your response: "Almost everything in that article…
All of this is wrong.
A noteworthy CS professor has zero relevance in a discussion about evolution or biology, particularly when he quotes people who aren't notable in the relevant field and tries to "demolish" strawmen. The word "demolish" is itself a huge red flag.
The sources he quoted are creationist crackpots linked to the Discovery Institute, a notoriously dishonest organization who disguises religion as science.
It is a mistake for the scientific community to engage with crackpots.
> Your comments -- in any other area of discussion on HN -- would probably get you flagged.
No, calling crackpots crackpots -- the mainstream consensus -- won't get me flagged. A big indicator of quackery is a persecution complex ("everyone is against me because of dogma", "they want to suppress dissenting views"). I think it's even in Carl Sagan's baloney detection kit. Sometimes people will call someone a crackpot because they've heard their arguments again and again, debunked them, and still that person insists, with a heavy dose of "the world is conspiring against me". It's ok to call that person a crackpot.
One last thing: in the US the term "Darwinism" (which the article uses) is almost always used by Creationists, and in a pejorative way. From Wikipedia (https://en.wikipedia.org/wiki/Darwinism#Other_uses):
"The term Darwinism is often used in the United States by promoters of creationism, notably by leading members of the intelligent design movement, as an epithet to attack evolution as though it were an ideology (an "ism") of philosophical naturalism, or atheism. For example, UC Berkeley law professor and author Phillip E. Johnson makes this accusation of atheism with reference to Charles Hodge's book What Is Darwinism? (1874). However, unlike Johnson, Hodge confined the term to exclude those like American botanist Asa Gray who combined Christian faith with support for Darwin's natural selection theory, before answering the question posed in the book's title by concluding: "It is Atheism." Creationists use the term Darwinism, often pejoratively, to imply that the theory has been held as true only by Darwin and a core group of his followers, whom they cast as dogmatic and inflexible in their belief."