Earlier quoted context omitted.
>But that’s completely at odds with how most software engineers work these days. Most software is grounded in an open source development and deployment tool chain. Imagine saying this with a straight face. Maybe in web development, but the vast majority of programmers are using closed source tools to produce closed source software. You're either thinking of a tiny picture vs the whole picture (web devs vs programming…
In applied math, data science, statistics, the OP is right: free software is the norm.
Except for perhaps optimizers (which some of the best are closed source, e.g. Mosek), the entire rest of the stack is open source.