Earlier quoted context omitted.
I'm not sure what you're purporting to show other than two people disagreeing with each other, without providing evidence... Sure, an individual subway car has "more capacity," but does a subway system have more capacity? For example, I rarely see BART trains come within five minutes of each other. A tunnel that allows cars within 10 seconds of each other could provide more capacity than a tunnel with higher-density…
Peak headtimes on BART are a train every 2-3 minutes, with trains carrying up to 1400 people (let's call it 1000 for the sake of argument). So at the low end, that's around 20,000 people an hour. If you had cars with a headway of 5 seconds then that's 1200 cars an hour, so you'd need an average occupancy of over 16 people per car. That's unrealistic, so yes, a subway tunnel has more capacity.
Even the Waterloo & City Line, the most unloved of all lines, manages 3.5k/hr over 260 days (16M/year, 5 day week).