Earlier quoted context omitted.
Your point is correct, but you can apply it in the other direction; adding a sin tax also has knock-on effects and often produce unexpected market distortions. I think your point just argues for pricing in more externalities, rather than abandoning the goal of pricing them and using even more opaque sin taxes instead.
True but I think some of these issues are also fundamentally harder to tax. Everything uses land and water, the problem is how much cattle use per calorie produced. I suppose you're saying we should tax usage of these things based on calorie produced?
If you're polluting as much as your neighbor but producing fewer calories you'll make less money, so market forces will take care of that and you'll be more likely to go out of business. There's no need to tax anything based on caloric production for the purposes of taxing pollution.
That of course assumes that you're producing the same product as your neighbor, but maybe he's making dogfood and you're making Kobe beef. Then it's OK for your business if you're producing fewer calories per unit of pollution.