OpenBSD: ChaCha20
FreeBSD: RC4
NetBSD: NIST CTR_DRBG using AES-128
HardenedBSD: ?
Dragonfly BSD: xor of outputs ChaCha20 and IBAA
Also on OpenBSD, major 3rd party packages often come with security improvements. For example, nginx and Apache run chrooted, and Chrome is pledged.I don't have the time to analyze privsep in base among the BSDs, but I can say it's extensive in OpenBSD.
I would love to see pledge support in HardenedBSD. I think they're doing good work. Hopefully FreeBSD can import some of it.
Also, Dragonfly is a first-class BSD citizen and should be included in comparisons. As a recent example, the project leader, Matthew Dillon, has done excellent work relating to Speculative Execution and collaborated with other BSDs which helped everyone. Also I'm pretty sure OpenBSD has imported a number of hardware drivers from Dragonfly.