Interestingly enough, this starts to bring up questions that have previously only been super active in science fiction circles, particularly, Star Trek: If you can perfectly recreate something down to the molecular level, what actually has value? (Assuming, someday, that synthetic versions are excessively cheap, in Star Trek's case.) If you can replicate cooked food perfectly, will people still claim that "real" food…
I seem to recall that Deep Space 9 touched in this in various ways during its run. Keep in mind that it was the first series that was fully made without Roddenberry input.
But you're probably right that DS9 made a bigger deal of it, especially with Sisko's dad and his restaurant featuring more than once, as well as various luxury products fetching high prices, when you might otherwise assume such high prices would quickly ensure they'd get replicated.