Earlier quoted context omitted.
If NYC didn't have a third dimension for transportation (subway and trains), no amount of busses and bikes would fix the soul-destroying traffic. The listed alternatives are all nice, but none of them allow you to move at 125+ mph. We should be able to get to our destination faster, not just with a bit less soul-destruction. Remote work is of course not for every or even most professions, and I don't see why it would…
Tokyo is a much bigger city. They solved the problem by building elevated toll highways. Much simpler solution than digging new holes everywhere and keeping those silly carts running.
The newer the subway lines in Tokyo are fun because they have to built in under the others (as referenced in the FAQ), you can tell you're on a new line when you descend down flights and flights of stairs.