Earlier quoted context omitted.
Microsoft: I suspect this blog post is out of date and that, post creators update, this is now safe. If so, maybe you want to edit it?
Wait so you CAN edit linux filesystem files with windows tools now? That was the main tripping point for me last time I tried out the WSL workflow. Mainly just because a bunch of files in our repo were apparently named in an ntfs unfriendly manner, so when I tried to merge etc. the repo would get corrupted.
Don't assume that just because the post hasn't been updated in a couple of months that it's somehow been magically "fixed" - it hasn't. In fact, its actually a really tricky problem to solve, and it'll take some time, a great deal of care, and some very well thought-out engineering before we arrive at a fix!
If/when we do fix the underlying issues we'll update this post and publish a new post announcing that the coast is clear ... until then, DO NOT CREATE/MODIFY THE LINUX FILESYSTEM USING WINDOWS TOOLS.
Thanks.