It seems NSA has spent all its budget on cool hacking tools and programs, exploiting hard drive firmware and routers and other crap. Yet the all SF-86 forms (except CIA's +) got stolen right under our noses. But again, nobody is going to feel cool defending and securing stuff, everyone wants to be on red team.
Stolen stuff includes millions of fingerprints. Those are obviously not hashed, so that's just the raw data I imagine. They'll learn lesson to not rely on fingerprints as much. Maybe that's one good thing coming out of it.
[+] CIA could still be affected, if for example some people there started at other agencies, or in the military (CIA likes to hire ex-Marines for example).