Because Acrobat will open these files, there is considerable pressure for Ghostscript to do so as well, though we do try to at least flag warnings to the user when something is found to be incorrect, giving the user a chance to intervene. Anyone who has done PDF composition for a "print ready" job (what a lie) from a client has run into this so many times. All we have to do is rearrange the pages in the right sorted…
I ended up with a fairly large set of shell scripts over Ghostscript to convert them into high DPI tif's to be able to reliably print them, it worked remarkably well considering that one was open source and free and the other was 1000's per license.