I think as time goes on, it's been interesting to see more of what Foucault was saying as becoming more and more interesting. The ability of power to generate the field or domain (what he called an "episteme") which defines the unconscious rules for research is something I think still being exposed regardless of any innate morality.
Besides, I think Chomsky's argument regarding "advancement" of morality to be so value-laden as to be sort of meaningless. There are more slaves in existence now than any other period of human history, and this "advancement" is still barely all that stable enough given the politics of Western countries which still maintain large (millions of people) cultural groups who absolutely would stop or even reverse this advancement given the chance.
Also its kind of ironic that Chomsky brings up Turing, because what we're talking about here is a scientifically-driven field which saw homosexuality as an illness and identified medical procedures as the cure which led to Turing's death.
Why is it that every decade we continue to identify fields of science, (which in his framework should be at the forefront of discovering this innate human nature and morality) that are the vanguards of extreme oppression? Why is it that science is consistently, across cultures and political systems, a domain that is almost always intrinsically tied to the justification and defense of the power structures of that culture? Soviet lamarckism, American global electronic surveillance, Western pathological views of homosexuality and psychology are all examples where science was twisted into merely a domain of power, exactly like Foucault described throughout history. Most would hand-wave these away as "not real science", but what even is real science then?
I mean god, we're still discovering new gaps in scientific knowledge that are so large and incomprehensible that we can barely even begin to know what outcomes they have lead to. The reproducibility crisis in medicine, psychology and other domains is portrayed as a sort of minor inconvenience rather than the shattering of one of the core and principal tenets of science in its production of knowledge.