> but many/most dotfiles reside at the top-level of your home directory, where it wouldn't be a good idea to initialize a VCS repository. Right. Which is why I use git with a workspace detached from the git directory. The git directory is in ~/dotfiles/.git, with "git config core.worktree ~", and I set an alias "dgit=git --git-dir ~/dotfiles/.git". The advantage of this method is that there are no symlinks to maintai…
I keep my dotfiles in a sub-directory (doesn't matter where) and use the following Rakefile to manage it:
https://github.com/tvon/dotfiles/blob/master/Rakefile
Then it's just `rake status` or `rake link` to symlink everything. I've only been using this for a few years but I haven't run into any problems yet.