jQuery is "bad" when complexity increases.
jQuery's strength is the CSS selector based approach, where CSS, HTML and JS all "speak the same language", but it also its greatest weakness, your JS code gets too tightly coupled with the structure of the HTML, which makes it harder to refactor.
Good code management can solve this, like using a class or class like construct (e.g. jQuery plugin) to create independent components. But jQuery misses a lot of features to be a truly component based solution. jQuery UI widget is somewhat closer but still missing features like other component based solution has, e.g. no built in template library.
One of the most common things in JS is to attach listeners to HTML elements, however the most common way when doing so in jQuery is that you have a bunch of selectors and then some listener code, but that type of statements is not self explanatory, you have no function name to describe what it is doing or any other context. You see all these registrations of event listeners scattered across the project. What do they do? Are they in use? Hard to tell because searching your source code for a CSS selector is very difficult. That is why jQuery based projects usually have tons of leftover code from the last refactor, no one dares to touch it.
Many component based libraries out there lets you register a method name on the HTML element directly. Much better. If you can't find the method/function name referenced in your code, you can delete it.
It is true that you can add event listeners inline on your HTML element, but that is not how jQeury is usually written, because it is selector based.