Earlier quoted context omitted.
Browsers opening an ftp:// link can simply prompt to open it in a different program, much like they did PDFs in the past. (I also don't think a browser should have to be a great PDF renderer, but here we are.)
And such programs can and will be downloaded from disreputable sites packed with malware and other junk, because the user needs that file. The great thing of having this stuff concentrated in a single program is that at least you have only one vendor relationship to consider.
The net security impact of dropping ftp support from the browser may well be negative.