I grew up in the south and was fortunate enough to move to the Bay a few years ago. I was expecting it to be some kind of utopia, with futuristic technology on every corner. In reality, it is roughly the same as anywhere else in America. A bit of a let down. The innovation does not take place in the infrastructure. Beautiful place, though!
Upgrading those systems is expensive and difficult, so it's not surprising old prices of equipment hung around until the end of their useful life. Especially since BART is going through a massive budget crisis at the moment (and this isn't the only one in its history).