I bet the US Navy has classified ocean floor maps that are far beyond those available to the public. Knowing the ocean floor better than your opponents is likely to be a big advantage when playing the various cat and mouse games with attack and ballistic missile subs that the US and the Soviet Union played for decades.
I doubt it. Most of the ocean floor is very deep, so deep that even modern submarines can't reach it. If I were a non-human, intelligent species, that would be a perfect place to hide.
The average depth of the Pacific ocean is around 4000 meters. The average depth of the Atlantic is about 3600 meters.