Earlier quoted context omitted.
Aeroperu 603.
Not knowing your altimeter is connected to your transponder, and that you provide the altitude along with your squawk to the atc screens is a pretty glaring wtf.
What's more alarming is that they had a perfectly functional radar altimeter and ought to have known that this is a completely self-contained system; it doesn't depend on the flight computers, the pitot-static system, or any external information such as your current position or a programmed flight plan. If it's telling you that you're only a couple thousand feet above terrain, you really should listen to it and respond accordingly.
Neither of the pilots did.