Live data from Hacker News

Viewing profile — marsdentech

marsdentech

HN member
Joined
Wed, Feb 03, 2021, 9:24 PM UTC
HN karma
3
Public activity
6 items

About marsdentech

No profile information was provided.

Recent public activity

  1. comment
    Comment #26865447

    You might be interested in reading about "chaperone proteins"!

  2. comment
    Comment #26020699

    A single flow cell contains a few thousand pores (I think this is what you mean by "holes") that are all at different stages of passing different molecules, with signal data being …

  3. comment
    Comment #26019996

    I used to run a department at a biotech where ~50% of our data came from MinIONs (although, that said, I'm a bioinformatician, rather than a molecular biologist), so I can answer y…

  4. comment
    Comment #26019812

    This is a common, and often justified, though not always fair, criticism. MinIONs have an error rate of around 10% for _any given base_. Moreover, these errors aren't entirely inde…

  5. comment
    Comment #26019675

    It's a complicated issue; I tend to think of the error component of any one MinION observation as being a function of the k-mer in the pore at the time (i.e. the subject of the obs…

  6. comment
    Comment #26019528

    As others have said, you're reading a sliding window of k-mers over the target sequence; I think for the MinION k is presently 5. To answer your question directly, it struggles wit…