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Viewing profile — ellimilial

ellimilial

HN member
Joined
Mon, Jan 13, 2014, 12:03 PM UTC
HN karma
162
Public activity
77 items

About ellimilial

Working at the crossroads of data engineering, AI/ML and biology/health.

https://ellarion.com

Take a look at our (largest of its kind) catalogue of biomedical datasets: https://biokeanos.com

Recent public activity

  1. comment
    Comment #31040355

    If it fits on a single machine - jq, flat files, JSON lines / avro if relatively flat. Change to a tabular format if when nesting not required. Postgres JSONB works, but it require…

  2. comment
    Comment #30699665

    Try a nociception, drug design or pharmacy group at your local university. Chances are they’ve been doing this for years.

  3. comment
    Comment #30051539

    Great content, but incredibly difficult to trawl through.

  4. comment
    Comment #30008539

    It's always great fun compounding new, manual 'indexes' when you discover you need another query.

  5. comment
    Comment #29445044

    With a lot of fuzziness, some state and temporal stuff.

  6. story
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  8. comment
    Comment #29093823

    Yes please, it took me over 5 secs to figure out what to click, felt like ages.

  9. comment
    Comment #29093813

    Diffusione Urino Sure it's delish, very appealing.

  10. comment
    Comment #28661260

    For https://biokeanos.com (biomedical data catalog and discovery tool), keeping things on disk and versioning by pushing to repo saved me months already on dubugging and maintenanc…

  11. comment
    Comment #28651476

    Isn’t this counting the lines with any G/C in them vs the total number of G/C literals?

  12. comment
    Comment #28651416

    A context might be useful. From what I gather, the author is a researcher in bioinformatics related field. This may indicate that they tend to work either alone or in a relatively …

  13. comment
    Comment #28538295

    The team being 'all-British' for obvious security reasons. Which I imagine might have felt like and insult to an injury to the 'little people', who, despite cracking the code, were…

  14. comment
    Comment #28139352

    The wording of the abstract indicates that this article itself has been auto-generated, right? :)

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  16. comment
    Comment #27225460

    A fair amount of drugs inhibiting it had to be recalled after https://pubmed.ncbi.nlm.nih.gov/16554806 and subsequent regulators actions.

  17. comment
    Comment #27224993

    Quite possible. Nobody wants another hERG fiasco.

  18. comment
    Comment #27202037

    @setr explained it really well. A side note, NoSQL also includes graph databases, dedicated to this type of node/relationship traversal.

  19. comment
    Comment #27199821

    Hi Jason, thank you very much for the background and the explanation. It is fascinating to see the progress in this direction. I started raising my eyebrow (in the best possible se…

  20. comment
    Comment #27199312

    Thank you for the response and clearing up the 'billion rows' / surly bonds confusion I had from reading project's Why Flat Data? section. I think I understand the target use case …

  21. comment
    Comment #27199011

    Very interesting how Github comes with more and more interesting 'actions' to turn repos into 'platforms' and moves us closer to serverless future. @idan how does it scale with the…

  22. comment
    Comment #27185015

    [...] all currently have favorable relations with the Kremlin, including [...] Georgia, [...] Ukraine. One might wonder how unfavourable relations with Kremlin look like then.

  23. comment
    Comment #27163239

    This really stuck a cord, thank you for sharing.

  24. comment
    Comment #26955128

    And they point that out: "There are other reasons for key logging, such as providing autocomplete functionality"

  25. comment
    Comment #26955114

    "There are other reasons for key logging, such as providing autocomplete functionality" - I don't think they're stretching anything.